Posts
altair-upset: The Evolution of UpSet plots in Altair
How I turned a Jupyter notebook into a full-fledged Python package for UpSet plots
Migration from Biocontainers to Seqera Containers: Part 2
nf-core containers automation: how it'll all work behind the curtain
Migration from Biocontainers to Seqera Containers: Part 1
What Seqera Containers is and why we want to move to it.
Pixi for Bioinformatics: Bioconda on HPC and Local Machines
Set up Pixi with conda-forge and Bioconda on an HPC cluster or laptop, install Nextflow, define tasks, and import an existing environment.yml.
Format Snakemake in Emacs with Apheleia and snakefmt
Configure Apheleia in Doom Emacs to format Snakemake files with snakefmt, including a Nix package and the exact set-formatter! setup.
Nextflow Emacs Workflow
How I hack on Nextflow scripts using Emacs
Personal Site Analytics in 2024
What's the move for something that gives you feedback and isn't creepy
Setting up Doom Emacs for Astro Development
The beauty of Astro is it's like the Nextflow of web frameworks
Encrypt org-journal with age in Doom Emacs
Set up age.el and rage in Doom Emacs, configure SSH key paths, and save org-journal entries as encrypted .org.age files when EasyPG hangs.
Site v3
Or is it like v5 at this point?